Use the builded version for linux. 
THANXitayperl said:wait you're having problems on win? it shouldn't look for libintl.h. pcsx2 provides a replacement: libintlmsc.h something like that...
try adding -D__MSCW32__,
- or -
edit common .h, and comment lines 57, 59, 60, 61 (the #ifdef, and its #else)
HTH